miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|219585271|gb|GH469141.1|GH469141 GCGTCCGCCGAGGCCCGGCCTGGGAGGGCTCCGGATCCGGCTGCGAGGATAGTTAAACATGAGTCTACGGAAGCAAACCC
CTAGTGACTTCTTAAAGCAAATCATCGGACGGCCAGTTGTGGTGAAACTAAATTCTGGAGTGGATTATCGAGGGGTCCTG
GCCTGCCTGGATGGCTACATGAATATAGCATTGGAACAGACGGAAGAGTATGTAAATGGACAGCTGAAGAATAAGTACGG
GGATGCGTTCATCCGAGGAAACAATGTGCTGTATATAAGTACCCAGAAGAGAAGGATGTGAAGACACCAGGAAGCAGCTC
TCCTCAGAGTTGGATAGAATTTGTTATGAAGTGTTTTGTTTTGTGTTTTGTTCTTTTATGATCTTCGTTGGTGTGTTTTC
ATAGTGTGTTTTGTTTTGGTGTTTTAATTGACATTGAAATAAGATAGAGGTGTTACATTACAAATTGAATCTTAAACTTT
TCACGTTTATGTTTACTTCTATCTGTACAAAATGCTAAAATTAAAAACAAAAACCCAGTTC




Most similar to sp|P62313|LSM6_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6
           OS=Mus musculus GN=Lsm6 PE=2 SV=1
          Length = 80

 Score =  162 bits (410), Expect = 1e-39
 Identities = 80/80 (100%), Positives = 80/80 (100%)
 Frame = +2

Query: 59  MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY 238
           MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
Sbjct: 1   MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY 60

Query: 239 GDAFIRGNNVLYISTQKRRM 298
           GDAFIRGNNVLYISTQKRRM
Sbjct: 61  GDAFIRGNNVLYISTQKRRM 80